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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11249351 chr1:121171942 G/A NBPF14 chr1:148003642-148025863:- 0.29 6.4 4.53E-10 Box Plot
BLCA rs11250003 chr8:10262695 C/T CCDC25 chr8:27590828-27630170:- -0.62 -6.63 1.18E-10 Box Plot
BLCA rs11250003 chr8:10262695 C/T CHMP7 chr8:23101150-23119513:+ -0.59 -6.79 4.26E-11 Box Plot
BLCA rs11250003 chr8:10262695 C/T CLN8 chr8:1703944-1749877:+ -0.63 -6.64 1.05E-10 Box Plot
BLCA rs11250003 chr8:10262695 C/T CNOT7 chr8:17082473-17104387:- -0.63 -7.02 9.89E-12 Box Plot
BLCA rs11250003 chr8:10262695 C/T DCTN6 chr8:30013813-30041156:+ -0.57 -6.21 1.41E-9 Box Plot
BLCA rs11250003 chr8:10262695 C/T ERI1 chr8:8859657-8974256:+ -0.63 -6.73 6.38E-11 Box Plot
BLCA rs11250003 chr8:10262695 C/T ERICH1 chr8:564746-688106:- -0.76 -7.54 3.45E-13 Box Plot
BLCA rs11250003 chr8:10262695 C/T FAM160B2 chr8:21946670-21962409:+ -0.48 -6.06 3.3E-9 Box Plot
BLCA rs11250003 chr8:10262695 C/T GTF2E2 chr8:30435835-30515768:- -0.67 -7.52 4.06E-13 Box Plot
BLCA rs11250003 chr8:10262695 C/T INTS9 chr8:28625178-28747759:- -0.64 -6.78 4.67E-11 Box Plot
BLCA rs11250003 chr8:10262695 C/T LEPROTL1 chr8:29952914-30034724:+ -0.6 -6.3 8.08E-10 Box Plot
BLCA rs11250003 chr8:10262695 C/T MCPH1 chr8:6264113-6506025:+ -0.61 -6.61 1.25E-10 Box Plot
BLCA rs11250003 chr8:10262695 C/T PCM1 chr8:17780349-17887453:+ -0.53 -6.28 9.26E-10 Box Plot
BLCA rs11250003 chr8:10262695 C/T POLR3D chr8:22102617-22112113:+ -0.55 -6.39 4.92E-10 Box Plot